A function to estimate f0 and alpha

All model parameters below were estimated by Barneche & Allen 2018 Ecology Letters doi: 10.1111/ele.12947. These parameters are for the best model (Model 2 in the paper online supplementary material) of fish resting metabolic rates reported in the paper, which also includes trophic level as a covariate.

Usage

metabolism(family, temp, troph_m, troph_sd = 1e-10)

Arguments

family

family fish

temp

Temperature in degrees Celsius

troph_m

Trophic level mean (from 1 to 5)

troph_sd

Trophic level sd (optional)

Value

dataframe with predicted metabolic parameters.

Details

All model parameters below were estimated by

Barneche & Allen 2018 Ecology Letters doi: 10.1111/ele.12947. These parameters are for the best model (Model 2 in the paper online supplementary material) of fish resting metabolic rates reported in the paper, which also includes trophic level as a covariate.

Examples

library(fishflux)
metabolism(family = "Pomacentridae", temp = 27, troph_m = 2)
#> values for b0 and alpha on family level
#> 
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#> Chain 1: 
#>          f0_m      f0_sd   alpha_m  alpha_sd        b0_m        b0_sd
#> 1 0.004571898 0.00205812 0.4256931 0.1035894 0.001415727 0.0006612888