All model parameters below were estimated by Barneche & Allen 2018 Ecology Letters doi: 10.1111/ele.12947. These parameters are for the best model (Model 2 in the paper online supplementary material) of fish resting metabolic rates reported in the paper, which also includes trophic level as a covariate.
metabolism(family, temp, troph_m, troph_sd = 1e-10)family fish
Temperature in degrees Celsius
Trophic level mean (from 1 to 5)
Trophic level sd (optional)
dataframe with predicted metabolic parameters.
All model parameters below were estimated by Barneche & Allen 2018 Ecology Letters doi: 10.1111/ele.12947. These parameters are for the best model (Model 2 in the paper online supplementary material) of fish resting metabolic rates reported in the paper, which also includes trophic level as a covariate.
library(fishflux)
metabolism(family = "Pomacentridae", temp = 27, troph_m = 2)
#> values for b0 and alpha on family level
#>
#> SAMPLING FOR MODEL 'getB0' NOW (CHAIN 1).
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#> Chain 1:
#> Chain 1: Elapsed Time: 0 seconds (Warm-up)
#> Chain 1: 0.001789 seconds (Sampling)
#> Chain 1: 0.001789 seconds (Total)
#> Chain 1:
#> f0_m f0_sd alpha_m alpha_sd b0_m b0_sd
#> 1 0.004513803 0.001991655 0.4256931 0.1035894 0.001415727 0.0006612888